Insertion junction: LMJ.RY0402.224007_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.224007
Chromosome:chromosome 17
Location:5757614
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g739250 FAP402 (1 of 2) IPR000014//IPR000719//IPR001245//IPR002290//IPR011009//IPR020635//IPR029016 - PAS domain // Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // GAF domain-like; Flagellar Associated Protein Kinase 402 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAGGAAAAAACGTCGGGACACCATGGCG
Internal bar code:ACCATTACAGTAGGTGATAACC

Confirmation - LEAP-Seq

LEAP-Seq distance:606
LEAP-Seq percent confirming:97.0304
LEAP-Seq n confirming:1405
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:ACCACCTTTGCGCTCAATAC
Suggested primer 2:CACACATGAAGGACGTCACC