Insertion junction: LMJ.RY0402.224025_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.224025
Chromosome:chromosome 6
Location:3784729
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g278162 PHC3 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAAGCGAGTCCAGCACACATGTGTAGTCC
Internal bar code:GGCTCTCAGCCGCGGATCGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:628
LEAP-Seq percent confirming:98.3168
LEAP-Seq n confirming:993
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGAGGGCAGTCTGCAGTT
Suggested primer 2:CAGCGTTCTGAACAAGACCA