Insertion junction: LMJ.RY0402.224026_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.224026
Chromosome:chromosome 1
Location:2140009
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g011630 (1 of 1) IPR001283//IPR002413//IPR003882//IPR014044 - Cysteine-rich secretory protein, allergen V5/Tpx-1-related // Ves allergen // Pistil-specific extensin-like protein // CAP domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTGGTACCAGGAGGTGGGTGGTTGGGG
Internal bar code:AAACCCGGCAGCAACCATCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:645
LEAP-Seq percent confirming:99.2479
LEAP-Seq n confirming:3563
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGCACCAACATGTACCG
Suggested primer 2:AAAAACTCCATGTTGGACGC