Insertion junction: LMJ.RY0402.224162_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.224162
Chromosome:chromosome 3
Location:4816270
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g178700 (1 of 7) IPR011989//IPR016024 - Armadillo-like helical // Armadillo-type fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGACGGTGCAGGCGTACGGAGTGTGGG
Internal bar code:GGACACCCACGGGGAGGGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1135
LEAP-Seq percent confirming:99.3992
LEAP-Seq n confirming:3309
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCAGGAGGTCTAAGTCGT
Suggested primer 2:CGGGATCCCAACTCTGTTAT