Insertion junction: LMJ.RY0402.224274_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.224274
Chromosome:chromosome 9
Location:1445187
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g398400 TRP5 Transient receptor potential ion channel protein; (1 of 46) PF00520 - Ion transport protein (Ion_trans) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCGCAGTGGCTGCATTTCATGACGGTGC
Internal bar code:CCGGCGAAACTACGGCCAGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:595
LEAP-Seq percent confirming:99.0248
LEAP-Seq n confirming:1320
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CATCTTAGCCGCACTGTTCA
Suggested primer 2:TGCACATCTAGCCACCTCAG