Insertion junction: LMJ.RY0402.224416_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.224416
Chromosome:chromosome 17
Location:3313833
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g723250 CPP1,CPE1 chloroplast processing enzyme; (1 of 1) PTHR11851//PTHR11851:SF152 - METALLOPROTEASE // PROTEIN UCR-2.3 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCTTCGTCCCTGTGTCCAGAGGCAACCC
Internal bar code:TGTCGGTGATTCCGCGACGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1035
LEAP-Seq percent confirming:98.9637
LEAP-Seq n confirming:955
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAACTGGACGTGAACGAGAA
Suggested primer 2:TATTAGAGGCGCCACAGCTT