Insertion junction: LMJ.RY0402.224442_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.224442
Chromosome:chromosome 2
Location:943918
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g079750 HKR1,HIK,HIK1 Histidine kinase response regulator of two-component system; (1 of 1) IPR000014//IPR001610//IPR001789//IPR003594//IPR003661//IPR004358//IPR005467//IPR011006 - PAS domain // PAC motif // Signal transduction response regulator, receiver domain // Histidine kinase-like ATPase, C-terminal domain // Signal transduction histidine kinase, dimerisation/phosphoacceptor domain // Signal transduction histidine kinase-related protein, C-terminal // Histidine kinase domain // CheY-like superfamily CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACATGCCCGTCATGGGCGGGATGGAGG
Internal bar code:CCGCGCACCTTTACATCGGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:493
LEAP-Seq percent confirming:98.8836
LEAP-Seq n confirming:620
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TACCACGCCCACATAGCATA
Suggested primer 2:TGGTGAAAAGATGGGTGTGA