Insertion junction: LMJ.RY0402.224585_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.224585
Chromosome:chromosome 6
Location:8847584
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g310601 TNP19 putative transposase; (1 of 781) IPR000104 - Antifreeze protein, type I CDS|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCCGCACGTCATCGTCGTCACGCGCAG
Internal bar code:TTAGGCCTGGGATCACCCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:624
LEAP-Seq percent confirming:98.3333
LEAP-Seq n confirming:1180
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAAATTATCTGCGAGGCA
Suggested primer 2:CGTACTCGTCCTCCACGATT