Insertion junction: LMJ.RY0402.225429_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.225429
Chromosome:chromosome 16
Location:1815348
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g655400 (1 of 1) K17985 - activating molecule in BECN1-regulated autophagy protein 1 (AMBRA1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATAGGGAGCGCAGGCGGCAGGCAGCAGG
Internal bar code:TTGTTACCTTTCGGTTGGCGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:570
LEAP-Seq percent confirming:85.7277
LEAP-Seq n confirming:913
LEAP-Seq n nonconfirming:152
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGTGATGGTGTGTGAAGC
Suggested primer 2:CATTAGCAACGAGCACCTGA