Insertion junction: LMJ.RY0402.225475_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.225475
Chromosome:chromosome 9
Location:4628162
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g396624 (1 of 1) IPR000104//IPR001841//IPR002110//IPR016024//IPR020683 - Antifreeze protein, type I // Zinc finger, RING-type // Ankyrin repeat // Armadillo-type fold // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAAACCGGGACGCAGGGGAAGGTGTGAG
Internal bar code:CAACGCCAGTCTACATGTGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:546
LEAP-Seq percent confirming:74.0725
LEAP-Seq n confirming:1697
LEAP-Seq n nonconfirming:594
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGCCTTCGAGATGCTAAC
Suggested primer 2:CCTCGTGCACATGCTCTTTA