Insertion junction: LMJ.RY0402.225507_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.225507
Chromosome:chromosome 2
Location:6173815
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g113700 (1 of 1) PF02151//PF08755 - UvrB/uvrC motif (UVR) // Hemimethylated DNA-binding protein YccV like (YccV-like) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGCCCAACGGTGAGCTCTTTTGCTGTGT
Internal bar code:CGCTCGACCCGCAGTTGCCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:527
LEAP-Seq percent confirming:91.9233
LEAP-Seq n confirming:1343
LEAP-Seq n nonconfirming:118
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTTTGCGTGTTTCAGG
Suggested primer 2:TTGCATGTGTGTTTGTGGTG