Insertion junction: LMJ.RY0402.225707_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.225707
Chromosome:chromosome 1
Location:4375567
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g029600 (1 of 3) 1.11.2.3 - Plant seed peroxygenase / Soybean peroxygenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCGTAACATTCCCTGGAGCCAGTCTGGC
Internal bar code:AACCTTTTTTTTTCAATTATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:409
LEAP-Seq percent confirming:99.5147
LEAP-Seq n confirming:2666
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCATCACTTCGTTCTCCACA
Suggested primer 2:CCTCTGAGCTCAACCTGACC