Insertion junction: LMJ.RY0402.225720_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.225720
Chromosome:chromosome 6
Location:6838215
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g295200 pCRY,PCRY1,CPH1 Plant-like Cryptochrome photoreceptor; (1 of 1) PTHR11455//PTHR11455:SF18 - CRYPTOCHROME // DEOXYRIBODIPYRIMIDINE PHOTO-LYASE, MITOCHONDRIAL 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCACTTGGGCTTACAATGTCACTGGCATC
Internal bar code:GGTCAGTGAGCCGAATAAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:621
LEAP-Seq percent confirming:99.5033
LEAP-Seq n confirming:4407
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGATGCTGGAGGAGGAC
Suggested primer 2:AAGAGGGCTACACCTGCTGA