Insertion junction: LMJ.RY0402.225846_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.225846
Chromosome:chromosome 9
Location:2421093
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g391550 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGCAGCTTCGTTGCCTTTAGTTTGTGAG
Internal bar code:AGGGCCACCTCAGAAGTTCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:602
LEAP-Seq percent confirming:94.697
LEAP-Seq n confirming:125
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCGTTGAGCTAGTACCG
Suggested primer 2:GATTACGCATGTGTTGGTGC