Insertion junction: LMJ.RY0402.226421_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.226421
Chromosome:chromosome 11
Location:761037
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g467632 (1 of 1) IPR008979//IPR017853 - Galactose-binding domain-like // Glycoside hydrolase superfamily intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAACGGCAAGCTACAGGTGCAGTGGTAC
Internal bar code:CTAGTGGTCCTTTTGTCTCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:799
LEAP-Seq percent confirming:89.9693
LEAP-Seq n confirming:879
LEAP-Seq n nonconfirming:98
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGAAGATCGTACCGCAC
Suggested primer 2:TGTCTCTGGCATCGTACTCG