Insertion junction: LMJ.RY0402.226435_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.226435
Chromosome:chromosome 10
Location:5447081
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre10.g458550 STIC2 Chloroplast protein biogenesis factor; (1 of 1) PTHR33449:SF1 - NUCLEOID-ASSOCIATED PROTEIN YBAB 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTGCTTGGATGCCTGCGGGCTTGGATAC
Internal bar code:GGCCAAGCTACGGGCAGGGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:487
LEAP-Seq percent confirming:99.4166
LEAP-Seq n confirming:852
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCAGGGCTGTAAGGGCTA
Suggested primer 2:TTTTGGACTGTGTGGCATGT