Insertion junction: LMJ.RY0402.226497_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.226497
Chromosome:chromosome 1
Location:4060018
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g026500 ASP3 (1 of 2) 3.4.23.12 - Nepenthesin / Nepenthes aspartic proteinase; Pepsin-type aspartyl protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCCAGGGCCCAGCAGATTGCTTGATGCG
Internal bar code:TAGAACGTGCAGGCCTAGGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:647
LEAP-Seq percent confirming:99.0442
LEAP-Seq n confirming:829
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AACTGGGTTGGCTTACAACG
Suggested primer 2:CACATGGAGAATGCGTCATC