Insertion junction: LMJ.RY0402.226817_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.226817
Chromosome:scaffold 18
Location:249071
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre18.g749997 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAGCGTATTCGAGCATTGGATCTTATGA
Internal bar code:TGATCGATGCTTTTATCCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:110
LEAP-Seq percent confirming:55.3957
LEAP-Seq n confirming:616
LEAP-Seq n nonconfirming:496
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCATCAAGGTTGCACTA
Suggested primer 2:GGACAGGAAGCAGGAGTCAG