Insertion junction: LMJ.RY0402.226819_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.226819
Chromosome:chromosome 6
Location:5018843
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g280250 (1 of 1) PTHR31018:SF3 - CELL WALL MANNOPROTEIN PST1-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCCCAGTGGCTTCCGGGCCTACTTGGCA
Internal bar code:ATATTGTCTTGAACTGGATTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:591
LEAP-Seq percent confirming:90.0316
LEAP-Seq n confirming:1707
LEAP-Seq n nonconfirming:189
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGTTCAGGCCCATGAGT
Suggested primer 2:TGCATGTAGCAAGCTGTTCC