Insertion junction: LMJ.RY0402.226861_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.226861
Chromosome:chromosome 6
Location:5021630
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g280250 (1 of 1) PTHR31018:SF3 - CELL WALL MANNOPROTEIN PST1-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTCGGTGGTGCTTGTGTACGCGGGCCAG
Internal bar code:AATCGGTTTGGGTCCAAGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1100
LEAP-Seq percent confirming:99.4406
LEAP-Seq n confirming:11732
LEAP-Seq n nonconfirming:66
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AAACGGTGTGTTCATACGCA
Suggested primer 2:CTGCCTTGGAGCTGTCCTAC