Insertion junction: LMJ.RY0402.226880_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.226880
Chromosome:chromosome 4
Location:1870073
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g217850 (1 of 3) IPR000104//IPR003439//IPR003593//IPR013525//IPR027417 - Antifreeze protein, type I // ABC transporter-like // AAA+ ATPase domain // ABC-2 type transporter // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGTTATTCAAGTCTATTTGGTCCCACT
Internal bar code:TACATGCAAGCAGTGGATATC

Confirmation - LEAP-Seq

LEAP-Seq distance:231
LEAP-Seq percent confirming:88.8337
LEAP-Seq n confirming:716
LEAP-Seq n nonconfirming:90
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAAACCCAACTGCCTAAA
Suggested primer 2:AGTGTGTTCGTTCCACACCA