Insertion junction: LMJ.RY0402.226897_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.226897
Chromosome:chromosome 17
Location:3134046
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g721500 GBSS1A,STA2,GBBSI,GBS1 (1 of 2) 2.4.1.242 - NDP-glucose--starch glucosyltransferase / Waxy protein; Granule-bound starch synthase IA 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGGTCCAACTACTTTCCACACTACTGG
Internal bar code:ATTCGCTCCGCGTAATCGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:615
LEAP-Seq percent confirming:99.4742
LEAP-Seq n confirming:2081
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGTTGTTGTAGCGGCAG
Suggested primer 2:AGAGTTTGCCATTTTGTGGG