Insertion junction: LMJ.RY0402.226897_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.226897
Chromosome:chromosome 17
Location:3134058
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g721500 GBSS1A,STA2,GBBSI,GBS1 (1 of 2) 2.4.1.242 - NDP-glucose--starch glucosyltransferase / Waxy protein; Granule-bound starch synthase IA 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGCGCATTAATCCGTGAGAGAGTAACAA
Internal bar code:GCGGGTCAACTGTCATCTCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1279
LEAP-Seq percent confirming:99.0
LEAP-Seq n confirming:2376
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGTTGTTGTAGCGGCAG
Suggested primer 2:AGAGTTTGCCATTTTGTGGG