Insertion junction: LMJ.RY0402.226949_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.226949
Chromosome:chromosome 12
Location:3332883
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g497652 (1 of 8) PTHR10366//PTHR10366:SF411 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCACACGTACGGAGGCGACAGGTGGGG
Internal bar code:GTTCGCTAGCATGCAAGGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:603
LEAP-Seq percent confirming:95.5085
LEAP-Seq n confirming:13609
LEAP-Seq n nonconfirming:640
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGAGTCCTAGCCAAGCC
Suggested primer 2:GTGTGTGTGTGCGTGTGTGT