Insertion junction: LMJ.RY0402.226964_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.226964
Chromosome:chromosome 7
Location:3643140
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre07.g337100 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAATCGCCCTAAGCTTATCGGTTGCGGG
Internal bar code:ACATACGTGGGTTGACATGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:48
LEAP-Seq percent confirming:93.0612
LEAP-Seq n confirming:684
LEAP-Seq n nonconfirming:51
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCAGGAACTCACCGGAC
Suggested primer 2:ACCTGTCATGTTCACCCCAT