Insertion junction: LMJ.RY0402.226981_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.226981
Chromosome:chromosome 1
Location:4608457
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g031650 CGLD12 Conserved in the Green Lineage and Diatoms; (1 of 2) PF05637 - galactosyl transferase GMA12/MNN10 family (Glyco_transf_34) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTCACCAGACACCCACTTTAAAAAGTA
Internal bar code:GCCACCTCCACGTCCTGGAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:580
LEAP-Seq percent confirming:98.5388
LEAP-Seq n confirming:1551
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GACTCCTCTTGACGAGCACC
Suggested primer 2:CAGTAGATAGCCGCTCCTGG