Insertion junction: LMJ.RY0402.227028_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.227028
Chromosome:chromosome 4
Location:143161
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g216840 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTACATGTTGCCAATCTTGAGGGTAATCC
Internal bar code:GGCCAACAGCAACGTCGCGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:576
LEAP-Seq percent confirming:38.5965
LEAP-Seq n confirming:506
LEAP-Seq n nonconfirming:805
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCACGAACAAGAGCGAA
Suggested primer 2:TAGCTCTCCCACTCAAGGGA