Insertion junction: LMJ.RY0402.227079_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.227079
Chromosome:chromosome 3
Location:390679
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g144887 (1 of 1) IPR000048//IPR003590//IPR006553 - IQ motif, EF-hand binding site // Leucine-rich repeat, ribonuclease inhibitor subtype // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGTGTGCCGCTCACACGTCCATGTGTCA
Internal bar code:ACAGACGGGTGGTTGTGCAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:543
LEAP-Seq percent confirming:42.8389
LEAP-Seq n confirming:2680
LEAP-Seq n nonconfirming:3576
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGTGTGTGTGTGTGTGT
Suggested primer 2:GTGCATATGTGTCGGGAGTG