Insertion junction: LMJ.RY0402.227121_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.227121
Chromosome:chromosome 11
Location:1794754
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g467500 (1 of 1) PF05664 - Plant family of unknown function (DUF810) (DUF810) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGCCGGGGGTTTCGCCATTCAGGGAGC
Internal bar code:TATTTTGCTTTTCATTTATACC

Confirmation - LEAP-Seq

LEAP-Seq distance:239
LEAP-Seq percent confirming:95.3014
LEAP-Seq n confirming:2150
LEAP-Seq n nonconfirming:106
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GATCACCCCTTGTGACGAGT
Suggested primer 2:GTACCGTATCCCCCACACAC