Insertion junction: LMJ.RY0402.227121_4

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.227121
Chromosome:chromosome 11
Location:1794767
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g467500 (1 of 1) PF05664 - Plant family of unknown function (DUF810) (DUF810) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCATTTCCTTTGGCCTCCTCGCCCCCT
Internal bar code:TGGAACGTGTACTACGGCTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:563
LEAP-Seq percent confirming:94.9123
LEAP-Seq n confirming:4384
LEAP-Seq n nonconfirming:235
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:GATCACCCCTTGTGACGAGT
Suggested primer 2:GTACCGTATCCCCCACACAC