Insertion junction: LMJ.RY0402.227157_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.227157
Chromosome:chromosome 16
Location:1105460
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g649800 PPR3,CYCR6 (1 of 1) PF02984//PF13041 - Cyclin, C-terminal domain (Cyclin_C) // PPR repeat family (PPR_2); PentatricoPeptide Repeat protein 3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCTCGCGGTGAGGGCTGCGTTGTCTGAG
Internal bar code:GTGAAGCGGGGATTGCGTAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:656
LEAP-Seq percent confirming:99.2289
LEAP-Seq n confirming:1673
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTTAAGGGTGTTGCGAT
Suggested primer 2:ATATCACATGGGCTGAAGGC