Insertion junction: LMJ.RY0402.227208_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.227208
Chromosome:chromosome 3
Location:5779106
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g188700 PLP6,PLAP6 Plastid lipid associated protein 6; (1 of 17) PF04755 - PAP_fibrillin (PAP_fibrillin) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTTTGTGAAGTCGGGACAGGTCGCGCTC
Internal bar code:CCATCCGGAATGGCGAGATATC

Confirmation - LEAP-Seq

LEAP-Seq distance:673
LEAP-Seq percent confirming:96.8491
LEAP-Seq n confirming:1168
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCTTGCAAGAGGTGTGT
Suggested primer 2:CTGTGTCGATGTGCTGTGTG