Insertion junction: LMJ.RY0402.227208_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.227208
Chromosome:chromosome 3
Location:5779107
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g188700 PLP6,PLAP6 Plastid lipid associated protein 6; (1 of 17) PF04755 - PAP_fibrillin (PAP_fibrillin) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAAGAGCGAGTGACCACTCCTCCGCGC
Internal bar code:AGCGCTTGTCCCGAGCGCGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:977
LEAP-Seq percent confirming:98.3706
LEAP-Seq n confirming:2113
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCTTGCAAGAGGTGTGT
Suggested primer 2:CTGTGTCGATGTGCTGTGTG