Insertion junction: LMJ.RY0402.227400_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.227400
Chromosome:chromosome 10
Location:1209402
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g426350 predicted protein; (1 of 2) 5.2.1.14 - Beta-carotene isomerase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGTGGGAGGGGAGTCGCTGTGTGGGCGG
Internal bar code:TTATCAGTATTTATACGTAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1129
LEAP-Seq percent confirming:97.3714
LEAP-Seq n confirming:852
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCAGCCTTGTGCTGTTGA
Suggested primer 2:CTCAGTGTGCAGTGCTTGGT