Insertion junction: LMJ.RY0402.227569_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.227569
Chromosome:chromosome 3
Location:7705941
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g203600 GDP6,GDPD6 Glycerophosphoryl diester phosphodiesterase, probably a phospholipase C; (1 of 1) IPR000909//IPR017946//IPR030395 - Phosphatidylinositol-specific phospholipase C, X domain // PLC-like phosphodiesterase, TIM beta/alpha-barrel domain // Glycerophosphodiester phosphodiesterase domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGTCCTTGCGAGTTGGGGCCTTCCTACC
Internal bar code:TTCGGGCCTATTATCCTTGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:456
LEAP-Seq percent confirming:97.3535
LEAP-Seq n confirming:15266
LEAP-Seq n nonconfirming:415
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGATGTATAGCTGGGTGT
Suggested primer 2:TCCTAACCACGACCACTTCC