Insertion junction: LMJ.RY0402.227673_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.227673
Chromosome:chromosome 1
Location:7523459
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g054150 NTRC1,NTR4 (1 of 1) PTHR10438//PTHR22912//PTHR22912:SF48 - THIOREDOXIN // DISULFIDE OXIDOREDUCTASE // NADPH-DEPENDENT THIOREDOXIN REDUCTASE 3; NADPH-dependent thioredoxin reductase C, chloroplastic 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGTTTGGGCTTTCCCCAACCGCTGGTCC
Internal bar code:GGATGTTCATAAGGGAGTATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:688
LEAP-Seq percent confirming:99.2668
LEAP-Seq n confirming:3791
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTGTTGCAGCAGATCAGT
Suggested primer 2:GGCTGCCTACTGAGGAACAC