Insertion junction: LMJ.RY0402.227713_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.227713
Chromosome:chromosome 9
Location:6357807
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g406900 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCAGGAGCAATAAATCAGGAGCCGCTG
Internal bar code:CCTCAATGCTTCTCGTTTACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:944
LEAP-Seq percent confirming:98.3436
LEAP-Seq n confirming:16921
LEAP-Seq n nonconfirming:285
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGAGAAAGGGGTGTGAAG
Suggested primer 2:GTGTGTGTGTGTGTGTGCGT