Insertion junction: LMJ.RY0402.227775_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.227775
Chromosome:chromosome 12
Location:4023022
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g517100 (1 of 2) 5.5.1.6 - Chalcone isomerase / Chalcone--flavanone isomerase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGATGGGATGCCAGGCGAGCATTGCCACT
Internal bar code:CTTGACCATGCGAGGCTGGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:784
LEAP-Seq percent confirming:99.3011
LEAP-Seq n confirming:12787
LEAP-Seq n nonconfirming:90
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGCATACATTTCACGTC
Suggested primer 2:TTGGAGTTTGAGCTGCAATG