Insertion junction: LMJ.RY0402.227775_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.227775
Chromosome:chromosome 12
Location:4023029
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g517100 (1 of 2) 5.5.1.6 - Chalcone isomerase / Chalcone--flavanone isomerase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACACCCTGGACGCCACCACGGATGTCC
Internal bar code:TCATTGATGCCTTTGGGGTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:583
LEAP-Seq percent confirming:99.1023
LEAP-Seq n confirming:16118
LEAP-Seq n nonconfirming:146
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGCATACATTTCACGTC
Suggested primer 2:TTGGAGTTTGAGCTGCAATG