Insertion junction: LMJ.RY0402.227791_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.227791
Chromosome:chromosome 7
Location:4092534
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g340650 CGL149 Conserved in the Green Lineage; (1 of 1) PF09430 - Protein of unknown function (DUF2012) (DUF2012) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTTACCGACTGTCCTACGGGTGCGACCG
Internal bar code:GAGGAGAGTAAGTAGGGGCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:729
LEAP-Seq percent confirming:98.062
LEAP-Seq n confirming:1012
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TGATCGTGTTCTCGCTGTTC
Suggested primer 2:AACTTTCAATGCATACCGGC