Insertion junction: LMJ.RY0402.227799_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.227799
Chromosome:chromosome 12
Location:7973984
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g552150 (1 of 1) PF00069//PF13185 - Protein kinase domain (Pkinase) // GAF domain (GAF_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTAGGTGGGTGGTTGTAGGTGGGTGGTT
Internal bar code:TCTAGGGATCGTTTGCATGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:299
LEAP-Seq percent confirming:99.1439
LEAP-Seq n confirming:11233
LEAP-Seq n nonconfirming:97
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTACGCCTTCACTTCTT
Suggested primer 2:AGGTGGGAGAACACTTGTGG