Insertion junction: LMJ.RY0402.228100_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.228100
Chromosome:chromosome 7
Location:505860
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g316050 CDJ2 Chloroplast DnaJ-like protein 2; (1 of 4) K03686 - molecular chaperone DnaJ (dnaJ) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGACACCAGCTCCGCCCCCCGACAGCAGT
Internal bar code:TAGCCCGCCATATGACAGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:607
LEAP-Seq percent confirming:94.937
LEAP-Seq n confirming:4294
LEAP-Seq n nonconfirming:229
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAAAGTCCTAACGAGCCG
Suggested primer 2:GATGGCTTTTGTTGACGGTT