Insertion junction: LMJ.RY0402.228210_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.228210
Chromosome:chromosome 9
Location:6053045
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g403145 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGTCCCAGGCCATTGAGGCAAACCTGA
Internal bar code:GAGTTGACACGTTCCAGCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:314
LEAP-Seq percent confirming:99.3535
LEAP-Seq n confirming:39190
LEAP-Seq n nonconfirming:255
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TATGCGTGTCAGAAGGTTCG
Suggested primer 2:GCACAGGTGTTGTGGAAATG