Insertion junction: LMJ.RY0402.228350_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.228350
Chromosome:chromosome 12
Location:1899516
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g511100 (1 of 1) IPR000104//IPR007379 - Antifreeze protein, type I // Tim44-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGCTGGTGGCGGGCGCGTCCGTCTTCG
Internal bar code:GGTATTGAGCACGGGATTGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1086
LEAP-Seq percent confirming:99.1785
LEAP-Seq n confirming:28735
LEAP-Seq n nonconfirming:238
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTTGGTGATGATGGTGGT
Suggested primer 2:CGAACGATCCGTATTGGAGT