Insertion junction: LMJ.RY0402.228475_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.228475
Chromosome:chromosome 3
Location:5140342
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g182000 (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCAGGGACGGCGAGGTGGAGGCCGCGG
Internal bar code:TACGCGACTATCAAACACTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:579
LEAP-Seq percent confirming:99.2608
LEAP-Seq n confirming:940
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTTGGGTCACTCACTGCC
Suggested primer 2:AGGTAAGCCCCACACCCTAC