Insertion junction: LMJ.RY0402.228483_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.228483
Chromosome:chromosome 6
Location:5620500
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g285900 FAP396 (1 of 2) IPR000104//IPR003590 - Antifreeze protein, type I // Leucine-rich repeat, ribonuclease inhibitor subtype; Flagellar Associated Protein 396 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGAGGGAGGAGGGGACAGGCGGGAACAT
Internal bar code:GCGAACTAGCTTTTAATTTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:503
LEAP-Seq percent confirming:83.3373
LEAP-Seq n confirming:3501
LEAP-Seq n nonconfirming:700
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTCCGTGTCCTTCTCTC
Suggested primer 2:GAGAGGAACGAGCAATGAGG