Insertion junction: LMJ.RY0402.228620_4

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.228620
Chromosome:chromosome 14
Location:1862770
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre14.g620500 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACCACGCAAGCCACAGCCAACGATTGA
Internal bar code:GGATGGCGCCGCCACCCATTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:592
LEAP-Seq percent confirming:98.1218
LEAP-Seq n confirming:1724
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCAAAGTGATCTGGGTC
Suggested primer 2:TACACCTGCCACCGACATAA