Insertion junction: LMJ.RY0402.228695_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.228695
Chromosome:chromosome 6
Location:4162486
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g278229 (1 of 3) IPR000104//IPR004333 - Antifreeze protein, type I // Transcription factor, SBP-box 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAAGCCCCTGACAAAATGCGGCTGCACAG
Internal bar code:CGGCGCAGTTGGGACAGTTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:645
LEAP-Seq percent confirming:98.253
LEAP-Seq n confirming:3487
LEAP-Seq n nonconfirming:62
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTCTTGGAACGCACATAG
Suggested primer 2:GACGAGGGCGAGAAGTACAG