Insertion junction: LMJ.RY0402.228840_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.228840
Chromosome:chromosome 3
Location:7972210
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g201950 (1 of 1) IPR003882//IPR008752//IPR024079 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin // Metallopeptidase, catalytic domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGTGCAGGCGGCGGCACTCTATTTATCC
Internal bar code:GACTGTAATGATTAGACCGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1100
LEAP-Seq percent confirming:99.5548
LEAP-Seq n confirming:3578
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCGACAAATGTGGAGGAA
Suggested primer 2:GAAGAAGAAGGCTTCACCCC