Insertion junction: LMJ.RY0402.228904_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.228904
Chromosome:chromosome 12
Location:5939962
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g534350 HCD2 (1 of 1) 1.1.1.157 - 3-hydroxybutyryl-CoA dehydrogenase / BHBD; 3-hydroxyacyl-CoA dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGTATGGATGGGACGAGGTAGACATGAG
Internal bar code:ACATATACCCGCGCCCTCGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1237
LEAP-Seq percent confirming:99.6413
LEAP-Seq n confirming:10278
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CTAATCCTCGGCAAGTAGCG
Suggested primer 2:TTATCGGTTTATCGCCTTCG